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PyMOL is a Molecular Graphics System created by Warren L. DeLano, Ph.D.


In Ubuntu (tested for >=11.10), you can just issue

sudo apt-get install pymol

Work-around to Ubuntu Bug

Ubuntu has a bug in the package where the shader files were not included. You can download them from

Then issue, as root

mkdir -p /usr/lib/pymodules/python2.7/pymol/data/shaders

Then move *.vs *.fs to that directory. You should now be able to start PyMOL.